IL_5OA3_096

3D structure

PDB id

5OA3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 40S-eIF2D-re-initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CGAGUAG*CGAAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OA3|1|3|C|255
5OA3|1|3|G|256
5OA3|1|3|A|257
5OA3|1|3|G|258
5OA3|1|3|U|259
5OA3|1|3|A|260
5OA3|1|3|G|261
*
5OA3|1|3|C|272
5OA3|1|3|G|273
5OA3|1|3|A|274
5OA3|1|3|A|275
5OA3|1|3|A|276
5OA3|1|3|G|277

Current chains

Chain 3

IRES mRNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA