IL_5ON6_065

3D structure

PDB id

5ON6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of haemanthamine bound to the 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGAUU*AGUUUUC

Length

12 nucleotides

Bulged bases

5ON6|1|1|U|1821

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ON6|1|1|G|1623
5ON6|1|1|G|1624
5ON6|1|1|A|1625
5ON6|1|1|U|1626
5ON6|1|1|U|1627
*
5ON6|1|1|A|1816
5ON6|1|1|G|1817
5ON6|1|1|U|1818
5ON6|1|1|U|1819
5ON6|1|1|U|1820
5ON6|1|1|U|1821
5ON6|1|1|C|1822

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AA

60S ribosomal protein L27-A

Chain AH

60S ribosomal protein L34-A

Chain AL

60S ribosomal protein L38