IL_5ON6_260

3D structure

PDB id

5ON6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of haemanthamine bound to the 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGAUACA*UGUAAUUG

Length

15 nucleotides

Bulged bases

5ON6|1|A|A|506

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ON6|1|A|C|479
5ON6|1|A|G|480
5ON6|1|A|A|481
5ON6|1|A|U|482
5ON6|1|A|A|483
5ON6|1|A|C|484
5ON6|1|A|A|485
*
5ON6|1|A|U|502
5ON6|1|A|G|503
5ON6|1|A|U|504
5ON6|1|A|A|505
5ON6|1|A|A|506
5ON6|1|A|U|507
5ON6|1|A|U|508
5ON6|1|A|G|509

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain K

40S ribosomal protein S9-A

Chain f

40S ribosomal protein S30-A