IL_5ON6_269

3D structure

PDB id

5ON6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of haemanthamine bound to the 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCCGGUC*GGAUUUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ON6|1|A|G|652
5ON6|1|A|C|653
5ON6|1|A|C|654
5ON6|1|A|G|655
5ON6|1|A|G|656
5ON6|1|A|U|657
5ON6|1|A|C|658
*
5ON6|1|A|G|676
5ON6|1|A|G|677
5ON6|1|A|A|678
5ON6|1|A|U|679
5ON6|1|A|U|680
5ON6|1|A|U|681
5ON6|1|A|C|682

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain F

40S ribosomal protein S4-A

Chain K

40S ribosomal protein S9-A