IL_5ON6_272

3D structure

PDB id

5ON6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of haemanthamine bound to the 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAAAAAAUUA*UAUAUUAGC

Length

19 nucleotides

Bulged bases

5ON6|1|A|U|794

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ON6|1|A|G|751
5ON6|1|A|A|752
5ON6|1|A|A|753
5ON6|1|A|A|754
5ON6|1|A|A|755
5ON6|1|A|A|756
5ON6|1|A|A|757
5ON6|1|A|U|758
5ON6|1|A|U|759
5ON6|1|A|A|760
*
5ON6|1|A|U|790
5ON6|1|A|A|791
5ON6|1|A|U|792
5ON6|1|A|A|793
5ON6|1|A|U|794
5ON6|1|A|U|795
5ON6|1|A|A|796
5ON6|1|A|G|797
5ON6|1|A|C|798

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain F

40S ribosomal protein S4-A

Chain K

40S ribosomal protein S9-A

Chain M

40S ribosomal protein S11-A

Chain X

40S ribosomal protein S22-A