IL_5ON6_471

3D structure

PDB id

5ON6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of haemanthamine bound to the 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GACGGUGGCCAUGGAAGUCGGAAUCCGCUAAGGAGUG*CUCAC

Length

42 nucleotides

Bulged bases

5ON6|1|1|A|1244

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ON6|1|1|G|1230
5ON6|1|1|A|1231
5ON6|1|1|C|1232
5ON6|1|1|G|1233
5ON6|1|1|G|1234
5ON6|1|1|U|1235
5ON6|1|1|G|1236
5ON6|1|1|G|1237
5ON6|1|1|C|1238
5ON6|1|1|C|1239
5ON6|1|1|A|1240
5ON6|1|1|U|1241
5ON6|1|1|G|1242
5ON6|1|1|G|1243
5ON6|1|1|A|1244
5ON6|1|1|A|1245
5ON6|1|1|G|1246
5ON6|1|1|U|1247
5ON6|1|1|C|1248
5ON6|1|1|G|1249
5ON6|1|1|G|1250
5ON6|1|1|A|1251
5ON6|1|1|A|1252
5ON6|1|1|U|1253
5ON6|1|1|C|1254
5ON6|1|1|C|1255
5ON6|1|1|G|1256
5ON6|1|1|C|1257
5ON6|1|1|U|1258
5ON6|1|1|A|1259
5ON6|1|1|A|1260
5ON6|1|1|G|1261
5ON6|1|1|G|1262
5ON6|1|1|A|1263
5ON6|1|1|G|1264
5ON6|1|1|U|1265
5ON6|1|1|G|1266
*
5ON6|1|1|C|1275
5ON6|1|1|U|1276
5ON6|1|1|C|1277
5ON6|1|1|A|1278
5ON6|1|1|C|1279

Current chains

Chain 1

25S ribosomal RNA

Nearby chains