IL_5ON6_494

3D structure

PDB id

5ON6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of haemanthamine bound to the 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

AGGAUCUGCUUAG*CAGAGCGGAGAAU

Length

26 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ON6|1|A|A|1678
5ON6|1|A|G|1679
5ON6|1|A|G|1680
5ON6|1|A|A|1681
5ON6|1|A|U|1682
5ON6|1|A|C|1683
5ON6|1|A|U|1684
5ON6|1|A|G|1685
5ON6|1|A|C|1686
5ON6|1|A|U|1687
5ON6|1|A|U|1688
5ON6|1|A|A|1689
5ON6|1|A|G|1690
*
5ON6|1|A|C|1711
5ON6|1|A|A|1712
5ON6|1|A|G|1713
5ON6|1|A|A|1714
5ON6|1|A|G|1715
5ON6|1|A|C|1716
5ON6|1|A|G|1717
5ON6|1|A|G|1718
5ON6|1|A|A|1719
5ON6|1|A|G|1720
5ON6|1|A|A|1721
5ON6|1|A|A|1722
5ON6|1|A|U|1723

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain 7

60S ribosomal protein L24-A

Chain H

40S ribosomal protein S6-A

Chain J

40S ribosomal protein S8-A