IL_5OOL_006

3D structure

PDB id

5OOL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

CAAG*CAAAG

Length

9 nucleotides

Bulged bases

5OOL|1|A|A|1892

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OOL|1|A|C|1880
5OOL|1|A|A|1881
5OOL|1|A|A|1882
5OOL|1|A|G|1883
*
5OOL|1|A|C|1890
5OOL|1|A|A|1891
5OOL|1|A|A|1892
5OOL|1|A|A|1893
5OOL|1|A|G|1894

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain 3

39S ribosomal protein L35, mitochondrial

Chain 6

39S ribosomal protein L38, mitochondrial

Chain F

39S ribosomal protein L4, mitochondrial

Chain M

39S ribosomal protein L15, mitochondrial

Chain g

39S ribosomal protein L49, mitochondrial