IL_5OOL_020
3D structure
- PDB id
- 5OOL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- GAAA*UC
- Length
- 6 nucleotides
- Bulged bases
- 5OOL|1|A|A|2198
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5OOL_020 not in the Motif Atlas
- Homologous match to IL_6PRV_002
- Geometric discrepancy: 0.2126
- The information below is about IL_6PRV_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5OOL|1|A|G|2197
5OOL|1|A|A|2198
5OOL|1|A|A|2199
5OOL|1|A|A|2200
*
5OOL|1|A|U|2211
5OOL|1|A|C|2212
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain J
- 39S ribosomal protein L11, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
Coloring options: