IL_5OPT_069

3D structure

PDB id

5OPT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of KSRP in context of Trypanosoma cruzi 40S

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GAGUA*UGGUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OPT|1|E|G|2079
5OPT|1|E|A|2080
5OPT|1|E|G|2081
5OPT|1|E|U|2082
5OPT|1|E|A|2083
*
5OPT|1|E|U|2094
5OPT|1|E|G|2095
5OPT|1|E|G|2096
5OPT|1|E|U|2097
5OPT|1|E|C|2098

Current chains

Chain E

18S rRNA

Nearby chains

Chain o

Ribosomal protein S19, putative

Chain t

40S ribosomal protein S15, putative

Chain u

40S ribosomal protein S18, putative