IL_5OPT_093

3D structure

PDB id

5OPT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of KSRP in context of Trypanosoma cruzi 40S

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GGCAG*CGGCAU

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OPT|1|E|G|981
5OPT|1|E|G|982
5OPT|1|E|C|983
5OPT|1|E|A|984
5OPT|1|E|G|985
*
5OPT|1|E|C|1181
5OPT|1|E|G|1182
5OPT|1|E|G|1183
5OPT|1|E|C|1184
5OPT|1|E|A|1185
5OPT|1|E|U|1186

Current chains

Chain E

18S rRNA

Nearby chains

Chain Q

Ribosomal protein S7, putative

Chain R

40S ribosomal protein S13, putative