IL_5OQL_077
3D structure
- PDB id
- 5OQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S pre-ribosome from Chaetomium thermophilum
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGUUGAUG*CUGAC
- Length
- 13 nucleotides
- Bulged bases
- 5OQL|1|2|U|83
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5OQL|1|2|G|80
5OQL|1|2|G|81
5OQL|1|2|U|82
5OQL|1|2|U|83
5OQL|1|2|G|84
5OQL|1|2|A|85
5OQL|1|2|U|86
5OQL|1|2|G|87
*
5OQL|1|2|C|262
5OQL|1|2|U|263
5OQL|1|2|G|264
5OQL|1|2|A|265
5OQL|1|2|C|266
Current chains
- Chain 2
- U3 snoRNA
Nearby chains
- Chain 1
- Small subunit ribosomal RNA; SSU rRNA
- Chain H
- U3 small nucleolar RNA-associated protein 11
- Chain M
- Utp17
- Chain N
- Utp18
- Chain U
- Nop58
- Chain V
- Snu13
Coloring options: