IL_5T7V_009

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGGG*CUGA

Length

8 nucleotides

Bulged bases

5T7V|1|A|G|396

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T7V_009 not in the Motif Atlas

Geometric match to IL_4V87_185

Geometric discrepancy: 0.3741

The information below is about IL_4V87_185

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_09990.3

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

3

Unit IDs

5T7V|1|A|U|383
5T7V|1|A|G|384
5T7V|1|A|G|385
5T7V|1|A|G|386
*
5T7V|1|A|C|394
5T7V|1|A|U|395
5T7V|1|A|G|396
5T7V|1|A|A|397

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain S7

30S ribosomal protein S16