IL_5T7V_035

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAC*GGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T7V_035 not in the Motif Atlas

Homologous match to IL_5J7L_061

Geometric discrepancy: 0.2221

The information below is about IL_5J7L_061

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

5T7V|1|A|C|1422
5T7V|1|A|A|1423
5T7V|1|A|C|1424
*
5T7V|1|A|G|1497
5T7V|1|A|G|1498
5T7V|1|A|G|1499

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain B

Large subunit ribosomal RNA; LSU rRNA

Chain S3

30S ribosomal protein S12