IL_5T7V_053

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAUUUG*UUGGUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T7V_053 not in the Motif Atlas

Geometric match to IL_6O5F_001

Geometric discrepancy: 0.2399

The information below is about IL_6O5F_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31007.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-cWW

Number of instances in this motif group

5

Unit IDs

5T7V|1|B|G|635
5T7V|1|B|A|636
5T7V|1|B|U|637
5T7V|1|B|U|638
5T7V|1|B|U|639
5T7V|1|B|G|640
*
5T7V|1|B|U|705
5T7V|1|B|U|706
5T7V|1|B|G|707
5T7V|1|B|G|708
5T7V|1|B|U|709
5T7V|1|B|C|710

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain LH

50S ribosomal protein L35

Chain LJ

50S ribosomal protein L4

Chain LO

50S ribosomal protein L15