IL_5T7V_081
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUGAGUAG*UGAAAUC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5T7V_081 not in the Motif Atlas
- Homologous match to IL_4WF9_048
- Geometric discrepancy: 0.1124
- The information below is about IL_4WF9_048
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
5T7V|1|B|G|1300
5T7V|1|B|U|1301
5T7V|1|B|G|1302
5T7V|1|B|A|1303
5T7V|1|B|G|1304
5T7V|1|B|U|1305
5T7V|1|B|A|1306
5T7V|1|B|G|1307
*
5T7V|1|B|U|2038
5T7V|1|B|G|2039
5T7V|1|B|A|2040
5T7V|1|B|A|2041
5T7V|1|B|A|2042
5T7V|1|B|U|2043
5T7V|1|B|C|2044
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain L5
- 50S ribosomal protein L22
- Chain LE
- 50S ribosomal protein L32
- Chain LJ
- 50S ribosomal protein L4
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