IL_5T7V_083

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUAAG*CGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T7V_083 not in the Motif Atlas

Homologous match to IL_7A0S_048

Geometric discrepancy: 0.1499

The information below is about IL_7A0S_048

Detailed Annotation

UAA/GAN

Broad Annotation

UAA/GAN

Motif group

IL_89021.2

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

6

Unit IDs

5T7V|1|B|C|1388
5T7V|1|B|U|1389
5T7V|1|B|A|1390
5T7V|1|B|A|1391
5T7V|1|B|G|1392
*
5T7V|1|B|C|1413
5T7V|1|B|G|1414
5T7V|1|B|A|1415
5T7V|1|B|U|1416
5T7V|1|B|G|1417

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain L2

50S ribosomal protein L2

Chain LG

50S ribosomal protein L34