IL_5T7V_084

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUGAGG*CGUAGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T7V_084 not in the Motif Atlas

Geometric match to IL_8ZA4_001

Geometric discrepancy: 0.3336

The information below is about IL_8ZA4_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76308.6

Basepair signature

cWW-tSH-tHW-tHS-cWW-cWW

Number of instances in this motif group

5

Unit IDs

5T7V|1|B|C|1393
5T7V|1|B|U|1394
5T7V|1|B|G|1395
5T7V|1|B|A|1396
5T7V|1|B|G|1397
5T7V|1|B|G|1398
*
5T7V|1|B|C|1407
5T7V|1|B|G|1408
5T7V|1|B|U|1409
5T7V|1|B|A|1410
5T7V|1|B|G|1411
5T7V|1|B|G|1412

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain L2

50S ribosomal protein L2

Chain LG

50S ribosomal protein L34