Loop IL_5T7V

3D structure

PDB id: 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
Description: Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

Loop

Sequence: GCGAAGCGUGCGAUUGGAUUGCACGU*GGAGAAGACAUUGUGUCUUCGAGUCGUU
Length: 54 nucleotides
Bulged bases: 5T7V|1|B|A|1497, 5T7V|1|B|U|1581, 5T7V|1|B|U|1582
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

5T7V|1|B|G|1485
5T7V|1|B|C|1486
5T7V|1|B|G|1487
5T7V|1|B|A|1488
5T7V|1|B|A|1489
5T7V|1|B|G|1490
5T7V|1|B|C|1491
5T7V|1|B|G|1492
5T7V|1|B|U|1493
5T7V|1|B|G|1494
5T7V|1|B|C|1495
5T7V|1|B|G|1496
5T7V|1|B|A|1497
5T7V|1|B|U|1498
5T7V|1|B|U|1499
5T7V|1|B|G|1500
5T7V|1|B|G|1501
5T7V|1|B|A|1502
5T7V|1|B|U|1503
5T7V|1|B|U|1504
5T7V|1|B|G|1505
5T7V|1|B|C|1506
5T7V|1|B|A|1507
5T7V|1|B|C|1508
5T7V|1|B|G|1509
5T7V|1|B|U|1510
*
5T7V|1|B|G|1571
5T7V|1|B|G|1572
5T7V|1|B|A|1573
5T7V|1|B|G|1574
5T7V|1|B|A|1575
5T7V|1|B|A|1576
5T7V|1|B|G|1577
5T7V|1|B|A|1578
5T7V|1|B|C|1579
5T7V|1|B|A|1580
5T7V|1|B|U|1581
5T7V|1|B|U|1582
5T7V|1|B|G|1583
5T7V|1|B|U|1584
5T7V|1|B|G|1585
5T7V|1|B|U|1586
5T7V|1|B|C|1587
5T7V|1|B|U|1588
5T7V|1|B|U|1589
5T7V|1|B|C|1590
5T7V|1|B|G|1591
5T7V|1|B|A|1592
5T7V|1|B|G|1593
5T7V|1|B|U|1594
5T7V|1|B|C|1595
5T7V|1|B|G|1596
5T7V|1|B|U|1597
5T7V|1|B|U|1598

Current chains

Chain B: 23S ribosomal RNA

Nearby chains

Chain LQ: 50S ribosomal protein L17

IL_5T7V_090