IL_5T7V_092

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAGUAAGG*CUGAGCUG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T7V_092 not in the Motif Atlas

Homologous match to IL_4WF9_059

Geometric discrepancy: 0.3581

The information below is about IL_4WF9_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T7V|1|B|C|1516
5T7V|1|B|A|1517
5T7V|1|B|G|1518
5T7V|1|B|U|1519
5T7V|1|B|A|1520
5T7V|1|B|A|1521
5T7V|1|B|G|1522
5T7V|1|B|G|1523
*
5T7V|1|B|C|1557
5T7V|1|B|U|1558
5T7V|1|B|G|1559
5T7V|1|B|A|1560
5T7V|1|B|G|1561
5T7V|1|B|C|1562
5T7V|1|B|U|1563
5T7V|1|B|G|1564

Current chains

Chain B

23S ribosomal RNA

Nearby chains