IL_5T7V_110
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCCG
- Length
- 16 nucleotides
- Bulged bases
- 5T7V|1|B|A|1965, 5T7V|1|B|U|1971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5T7V_110 not in the Motif Atlas
- Homologous match to IL_7A0S_072
- Geometric discrepancy: 0.2409
- The information below is about IL_7A0S_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.3
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Number of instances in this motif group
- 2
Unit IDs
5T7V|1|B|C|1961
5T7V|1|B|G|1962
5T7V|1|B|A|1963
5T7V|1|B|A|1964
5T7V|1|B|A|1965
5T7V|1|B|U|1966
5T7V|1|B|U|1967
5T7V|1|B|C|1968
5T7V|1|B|C|1969
5T7V|1|B|U|1970
5T7V|1|B|U|1971
5T7V|1|B|G|1972
*
5T7V|1|B|C|1988
5T7V|1|B|C|1989
5T7V|1|B|C|1990
5T7V|1|B|G|1991
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain L2
- 50S ribosomal protein L2
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