IL_5T7V_116

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AAAUUC*GGCUUU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T7V_116 not in the Motif Atlas

Geometric match to IL_6O5F_001

Geometric discrepancy: 0.349

The information below is about IL_6O5F_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31007.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-cWW

Number of instances in this motif group

5

Unit IDs

5T7V|1|B|A|2121
5T7V|1|B|A|2122
5T7V|1|B|A|2123
5T7V|1|B|U|2124
5T7V|1|B|U|2125
5T7V|1|B|C|2126
*
5T7V|1|B|G|2217
5T7V|1|B|G|2218
5T7V|1|B|C|2219
5T7V|1|B|U|2220
5T7V|1|B|U|2221
5T7V|1|B|U|2222

Current chains

Chain B

23S ribosomal RNA

Nearby chains