IL_5T7V_146
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGUAG*UGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5T7V_146 not in the Motif Atlas
- Homologous match to IL_5J7L_027
- Geometric discrepancy: 0.2169
- The information below is about IL_5J7L_027
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
5T7V|1|A|C|588
5T7V|1|A|G|589
5T7V|1|A|U|590
5T7V|1|A|A|591
5T7V|1|A|G|592
*
5T7V|1|A|U|765
5T7V|1|A|G|766
5T7V|1|A|A|767
5T7V|1|A|U|768
5T7V|1|A|G|769
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain B
- Large subunit ribosomal RNA; LSU rRNA
- Chain S3
- 30S ribosomal protein S12
- Chain S6
- 30S ribosomal protein S15
- Chain S8
- 30S ribosomal protein S17
- Chain SF
- 30S ribosomal protein S8
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