IL_5T7V_153

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UAAG*UUGACUGCCGGUGACAAACCGGAGGAAGGUG

Length

35 nucleotides

Bulged bases

5T7V|1|A|U|1169, 5T7V|1|A|C|1178, 5T7V|1|A|U|1193

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T7V|1|A|U|1127
5T7V|1|A|A|1128
5T7V|1|A|A|1129
5T7V|1|A|G|1130
*
5T7V|1|A|U|1164
5T7V|1|A|U|1165
5T7V|1|A|G|1166
5T7V|1|A|A|1167
5T7V|1|A|C|1168
5T7V|1|A|U|1169
5T7V|1|A|G|1170
5T7V|1|A|C|1171
5T7V|1|A|C|1172
5T7V|1|A|G|1173
5T7V|1|A|G|1174
5T7V|1|A|U|1175
5T7V|1|A|G|1176
5T7V|1|A|A|1177
5T7V|1|A|C|1178
5T7V|1|A|A|1179
5T7V|1|A|A|1180
5T7V|1|A|A|1181
5T7V|1|A|C|1182
5T7V|1|A|C|1183
5T7V|1|A|G|1184
5T7V|1|A|G|1185
5T7V|1|A|A|1186
5T7V|1|A|G|1187
5T7V|1|A|G|1188
5T7V|1|A|A|1189
5T7V|1|A|A|1190
5T7V|1|A|G|1191
5T7V|1|A|G|1192
5T7V|1|A|U|1193
5T7V|1|A|G|1194

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain S1

30S ribosomal protein S10