IL_5T7V_178

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUAAG*UGAUGG

Length

11 nucleotides

Bulged bases

5T7V|1|B|G|1569

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T7V_178 not in the Motif Atlas

Homologous match to IL_4WF9_116

Geometric discrepancy: 0.2805

The information below is about IL_4WF9_116

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25186.4

Basepair signature

cWW-L-R-L-R-L-R-cWW

Number of instances in this motif group

6

Unit IDs

5T7V|1|B|C|1511
5T7V|1|B|U|1512
5T7V|1|B|A|1513
5T7V|1|B|A|1514
5T7V|1|B|G|1515
*
5T7V|1|B|U|1565
5T7V|1|B|G|1566
5T7V|1|B|A|1567
5T7V|1|B|U|1568
5T7V|1|B|G|1569
5T7V|1|B|G|1570

Current chains

Chain B

23S ribosomal RNA

Nearby chains