IL_5T7V_181
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAACUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5T7V_181 not in the Motif Atlas
- Homologous match to IL_4WF9_117
- Geometric discrepancy: 0.1235
- The information below is about IL_4WF9_117
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22854.4
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 7
Unit IDs
5T7V|1|B|G|1710
5T7V|1|B|G|1711
5T7V|1|B|A|1712
5T7V|1|B|A|1713
5T7V|1|B|C|1714
5T7V|1|B|U|1715
5T7V|1|B|C|1716
5T7V|1|B|G|1717
5T7V|1|B|G|1718
*
5T7V|1|B|C|2017
5T7V|1|B|U|2018
5T7V|1|B|G|2019
5T7V|1|B|U|2020
5T7V|1|B|C|2021
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain LC
- 50S ribosomal protein L3
- Chain LN
- 50S ribosomal protein L14
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