IL_5T7V_197
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUGUCG*CGGCAUAG
- Length
- 14 nucleotides
- Bulged bases
- 5T7V|1|B|U|2723, 5T7V|1|B|U|2739, 5T7V|1|B|A|2740
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5T7V_197 not in the Motif Atlas
- Geometric match to IL_6O5F_001
- Geometric discrepancy: 0.3857
- The information below is about IL_6O5F_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31007.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
5T7V|1|B|U|2722
5T7V|1|B|U|2723
5T7V|1|B|G|2724
5T7V|1|B|U|2725
5T7V|1|B|C|2726
5T7V|1|B|G|2727
*
5T7V|1|B|C|2734
5T7V|1|B|G|2735
5T7V|1|B|G|2736
5T7V|1|B|C|2737
5T7V|1|B|A|2738
5T7V|1|B|U|2739
5T7V|1|B|A|2740
5T7V|1|B|G|2741
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain L1
- 50S ribosomal protein L19
- Chain LQ
- 50S ribosomal protein L17
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