IL_5TBW_055

3D structure

PDB id

5TBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGGUGGCC*GGAAUCCG

Length

16 nucleotides

Bulged bases

5TBW|1|1|G|1236

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12750.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

5TBW|1|1|C|1232
5TBW|1|1|G|1233
5TBW|1|1|G|1234
5TBW|1|1|U|1235
5TBW|1|1|G|1236
5TBW|1|1|G|1237
5TBW|1|1|C|1238
5TBW|1|1|C|1239
*
5TBW|1|1|G|1249
5TBW|1|1|G|1250
5TBW|1|1|A|1251
5TBW|1|1|A|1252
5TBW|1|1|U|1253
5TBW|1|1|C|1254
5TBW|1|1|C|1255
5TBW|1|1|G|1256

Current chains

Chain 1

25S ribosomal RNA

Nearby chains