IL_5TBW_126

3D structure

PDB id

5TBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAACG*UUG

Length

8 nucleotides

Bulged bases

5TBW|1|1|U|3259

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_60154.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

5TBW|1|1|C|3225
5TBW|1|1|A|3226
5TBW|1|1|A|3227
5TBW|1|1|C|3228
5TBW|1|1|G|3229
*
5TBW|1|1|U|3258
5TBW|1|1|U|3259
5TBW|1|1|G|3260

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AG

60S ribosomal protein L33-A

Chain n

60S ribosomal protein L6-A

Chain u

60S ribosomal protein L14-A

Chain w

60S ribosomal protein L16-A