IL_5TBW_165
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GCC*GUGC
- Length
- 7 nucleotides
- Bulged bases
- 5TBW|1|A|U|280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5TBW_165 not in the Motif Atlas
- Geometric match to IL_7RQB_025
- Geometric discrepancy: 0.3546
- The information below is about IL_7RQB_025
- Detailed Annotation
- Intercalated cWW
- Broad Annotation
- Intercalated cWW
- Motif group
- IL_52767.4
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
5TBW|1|A|G|274
5TBW|1|A|C|275
5TBW|1|A|C|276
*
5TBW|1|A|G|279
5TBW|1|A|U|280
5TBW|1|A|G|281
5TBW|1|A|C|282
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain H
- 40S ribosomal protein S6-A
Coloring options: