IL_5TBW_185
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UUU*AUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5TBW_185 not in the Motif Atlas
- Geometric match to IL_5J7L_326
- Geometric discrepancy: 0.1645
- The information below is about IL_5J7L_326
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_28037.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
5TBW|1|A|U|748
5TBW|1|A|U|749
5TBW|1|A|U|750
*
5TBW|1|A|A|799
5TBW|1|A|U|800
5TBW|1|A|G|801
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain F
- 40S ribosomal protein S4-A
- Chain I
- 40S ribosomal protein S7-A
- Chain M
- 40S ribosomal protein S11-A
- Chain X
- 40S ribosomal protein S22-A
Coloring options: