3D structure

PDB id
5TBW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
ACGUUU*AUCGU
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5TBW|1|A|A|817
5TBW|1|A|C|818
5TBW|1|A|G|819
5TBW|1|A|U|820
5TBW|1|A|U|821
5TBW|1|A|U|822
*
5TBW|1|A|A|850
5TBW|1|A|U|851
5TBW|1|A|C|852
5TBW|1|A|G|853
5TBW|1|A|U|854

Current chains

Chain A
18S ribosomal RNA

Nearby chains

Chain I
40S ribosomal protein S7-A
Chain z
60S ribosomal protein L19-A

Coloring options:

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