IL_5TBW_431
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGGAUC*GUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5TBW_431 not in the Motif Atlas
- Homologous match to IL_4V88_435
- Geometric discrepancy: 0.0454
- The information below is about IL_4V88_435
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_22046.1
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
5TBW|1|sR|G|985
5TBW|1|sR|G|986
5TBW|1|sR|G|987
5TBW|1|sR|A|988
5TBW|1|sR|U|989
5TBW|1|sR|C|990
*
5TBW|1|sR|G|1014
5TBW|1|sR|U|1015
5TBW|1|sR|C|1016
Current chains
- Chain sR
- 18S ribosomal RNA
Nearby chains
- Chain AR
- Large subunit ribosomal RNA; LSU rRNA
- Chain CD
- 60S ribosomal protein L2-A
- Chain DR
- 60S ribosomal protein L43-A
- Chain c4
- 40S ribosomal protein S14-B
- Chain d6
- 40S ribosomal protein S26-B
Coloring options: