IL_5TBW_476
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUAGCC*GUUGUUAC
- Length
- 14 nucleotides
- Bulged bases
- 5TBW|1|1|U|3354, 5TBW|1|1|U|3355
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32449.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
5TBW|1|1|G|3345
5TBW|1|1|U|3346
5TBW|1|1|A|3347
5TBW|1|1|G|3348
5TBW|1|1|C|3349
5TBW|1|1|C|3350
*
5TBW|1|1|G|3353
5TBW|1|1|U|3354
5TBW|1|1|U|3355
5TBW|1|1|G|3356
5TBW|1|1|U|3357
5TBW|1|1|U|3358
5TBW|1|1|A|3359
5TBW|1|1|C|3360
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 5
- 60S ribosomal protein L22-A
- Chain J
- 40S ribosomal protein S8-A
- Chain z
- 60S ribosomal protein L19-A
Coloring options: