IL_5TBW_507

3D structure

PDB id

5TBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AUAAGGA*UUU

Length

10 nucleotides

Bulged bases

5TBW|1|A|G|1228

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TBW|1|A|A|1224
5TBW|1|A|U|1225
5TBW|1|A|A|1226
5TBW|1|A|A|1227
5TBW|1|A|G|1228
5TBW|1|A|G|1229
5TBW|1|A|A|1230
*
5TBW|1|A|U|1257
5TBW|1|A|U|1258
5TBW|1|A|U|1259

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain L

40S ribosomal protein S10-A

Chain N

40S ribosomal protein S12

Chain g

Ubiquitin-40S ribosomal protein S31