IL_5TBW_512

3D structure

PDB id

5TBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AGAAGGG*CUCCAUCU

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TBW|1|A|A|1691
5TBW|1|A|G|1692
5TBW|1|A|A|1693
5TBW|1|A|A|1694
5TBW|1|A|G|1695
5TBW|1|A|G|1696
5TBW|1|A|G|1697
*
5TBW|1|A|C|1703
5TBW|1|A|U|1704
5TBW|1|A|C|1705
5TBW|1|A|C|1706
5TBW|1|A|A|1707
5TBW|1|A|U|1708
5TBW|1|A|C|1709
5TBW|1|A|U|1710

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain 7

60S ribosomal protein L24-A

Chain H

40S ribosomal protein S6-A