IL_5TGA_213

3D structure

PDB id

5TGA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGCUA*UAAAAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TGA|1|2|C|1644
5TGA|1|2|G|1645
5TGA|1|2|C|1646
5TGA|1|2|U|1647
5TGA|1|2|A|1648
*
5TGA|1|2|U|1752
5TGA|1|2|A|1753
5TGA|1|2|A|1754
5TGA|1|2|A|1755
5TGA|1|2|A|1756||A
5TGA|1|2|G|1757

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain D3

40S ribosomal protein S23-A

Chain E0

40S ribosomal protein S30-A

Chain Q1

60S ribosomal protein L41-A