IL_5TGA_280
3D structure
- PDB id
- 5TGA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UUU*AGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5TGA_280 not in the Motif Atlas
- Homologous match to IL_8C3A_050
- Geometric discrepancy: 0.1243
- The information below is about IL_8C3A_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
5TGA|1|5|U|1123
5TGA|1|5|U|1124
5TGA|1|5|U|1125
*
5TGA|1|5|A|1133
5TGA|1|5|G|1134
5TGA|1|5|A|1135
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain m0
- 60S ribosomal protein L10
- Chain n1
- 60S ribosomal protein L21-A
- Chain n9
- 60S ribosomal protein L29
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