IL_5TGM_019
3D structure
- PDB id
- 5TGM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GGAUAAAUC*GGAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 5TGM|1|1|A|519
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5TGM_019 not in the Motif Atlas
- Homologous match to IL_5TBW_019
- Geometric discrepancy: 0.074
- The information below is about IL_5TBW_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74024.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
5TGM|1|1|G|517
5TGM|1|1|G|518
5TGM|1|1|A|519
5TGM|1|1|U|520
5TGM|1|1|A|521
5TGM|1|1|A|522
5TGM|1|1|A|523
5TGM|1|1|U|524
5TGM|1|1|C|525
*
5TGM|1|1|G|567
5TGM|1|1|G|568
5TGM|1|1|A|569
5TGM|1|1|A|570
5TGM|1|1|U|571
5TGM|1|1|A|572
5TGM|1|1|C|573
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain L4
- 60S ribosomal protein L4-A
- Chain L7
- 60S ribosomal protein L7-A
- Chain M4
- 60S ribosomal protein L14-A
- Chain N0
- 60S ribosomal protein L20-A
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