IL_5TGM_482

3D structure

PDB id

5TGM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

AAUAAGGA*UUUU

Length

12 nucleotides

Bulged bases

5TGM|1|2|G|1211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TGM|1|2|A|1206
5TGM|1|2|A|1207
5TGM|1|2|U|1208
5TGM|1|2|A|1209
5TGM|1|2|A|1210
5TGM|1|2|G|1211
5TGM|1|2|G|1212
5TGM|1|2|A|1213
*
5TGM|1|2|U|1240
5TGM|1|2|U|1241
5TGM|1|2|U|1242
5TGM|1|2|U|1243

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain C0

40S ribosomal protein S10-A,40S Ribosomal Protein S10

Chain C2

40S Ribosomal Protein S12,40S ribosomal protein S12

Chain E1

Ubiquitin-40S ribosomal protein S31