IL_5U9F_128

3D structure

PDB id

5U9F (explore in PDB, NAKB, or RNA 3D Hub)

Description

3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAAGAAGG*UUGUAAAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5U9F|1|A|U|409
5U9F|1|A|G|410
5U9F|1|A|A|411
5U9F|1|A|A|412
5U9F|1|A|G|413
5U9F|1|A|A|414
5U9F|1|A|A|415
5U9F|1|A|G|416
5U9F|1|A|G|417
*
5U9F|1|A|U|426
5U9F|1|A|U|427
5U9F|1|A|G|428
5U9F|1|A|U|429
5U9F|1|A|A|430
5U9F|1|A|A|431
5U9F|1|A|A|432
5U9F|1|A|G|433

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain D

30S ribosomal protein S4