IL_5U9F_153

3D structure

PDB id

5U9F (explore in PDB, NAKB, or RNA 3D Hub)

Description

3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

5U9F|1|A|U|1029, 5U9F|1|A|G|1032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5U9F|1|A|G|1003
5U9F|1|A|A|1004
5U9F|1|A|A|1005
5U9F|1|A|G|1006
*
5U9F|1|A|U|1023
5U9F|1|A|G|1024
5U9F|1|A|U|1025
5U9F|1|A|G|1026
5U9F|1|A|C|1027
5U9F|1|A|C|1028
5U9F|1|A|U|1029
5U9F|1|A|U|1030
5U9F|1|A|C|1031
5U9F|1|A|G|1032
5U9F|1|A|G|1033
5U9F|1|A|G|1034
5U9F|1|A|A|1035
5U9F|1|A|A|1036
5U9F|1|A|C|1037

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain N

30S ribosomal protein S14