IL_5U9F_179
3D structure
- PDB id
- 5U9F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAGGCUUUGAAGU*AUGGAGCCGACCUUGAAAUAC
- Length
- 35 nucleotides
- Bulged bases
- 5U9F|1|01|U|2132, 5U9F|1|01|U|2155, 5U9F|1|01|U|2172, 5U9F|1|01|A|2173
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5U9F|1|01|G|2124
5U9F|1|01|G|2125
5U9F|1|01|A|2126
5U9F|1|01|G|2127
5U9F|1|01|G|2128
5U9F|1|01|C|2129
5U9F|1|01|U|2130
5U9F|1|01|U|2131
5U9F|1|01|U|2132
5U9F|1|01|G|2133
5U9F|1|01|A|2134
5U9F|1|01|A|2135
5U9F|1|01|G|2136
5U9F|1|01|U|2137
*
5U9F|1|01|A|2154
5U9F|1|01|U|2155
5U9F|1|01|G|2156
5U9F|1|01|G|2157
5U9F|1|01|A|2158
5U9F|1|01|G|2159
5U9F|1|01|C|2160
5U9F|1|01|C|2161
5U9F|1|01|G|2162
5U9F|1|01|A|2163
5U9F|1|01|C|2164
5U9F|1|01|C|2165
5U9F|1|01|U|2166
5U9F|1|01|U|2167
5U9F|1|01|G|2168
5U9F|1|01|A|2169
5U9F|1|01|A|2170
5U9F|1|01|A|2171
5U9F|1|01|U|2172
5U9F|1|01|A|2173
5U9F|1|01|C|2174
Current chains
- Chain 01
- 23S ribosomal RNA
Nearby chains
- Chain 03
- 50S ribosomal protein L1
- Chain X
- Transfer RNA; tRNA
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