IL_5UQ7_150

3D structure

PDB id

5UQ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

5UQ7|1|a|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5UQ7_150 not in the Motif Atlas

Homologous match to IL_4LFB_036

Geometric discrepancy: 0.1336

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

5UQ7|1|a|G|925
5UQ7|1|a|G|926
5UQ7|1|a|G|927
*
5UQ7|1|a|U|1390
5UQ7|1|a|U|1391

Current chains

Chain a

16S rRNA

Nearby chains

Chain x

DnaX ribosomal frameshifting element