IL_5UYK_027
3D structure
- PDB id
- 5UYK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GA*UGC
- Length
- 5 nucleotides
- Bulged bases
- 5UYK|1|01|G|914
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5UYK_027 not in the Motif Atlas
- Homologous match to IL_5J7L_271
- Geometric discrepancy: 0.1569
- The information below is about IL_5J7L_271
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.13
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 49
Unit IDs
5UYK|1|01|G|862
5UYK|1|01|A|863
*
5UYK|1|01|U|913
5UYK|1|01|G|914
5UYK|1|01|C|915
Current chains
- Chain 01
- 23S ribosomal RNA
Nearby chains
- Chain 02
- 5S ribosomal RNA; 5S rRNA
- Chain 15
- 50S ribosomal protein L16
- Chain 25
- 50S ribosomal protein L27
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