IL_5UYK_113
3D structure
- PDB id
- 5UYK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AG*CAU
- Length
- 5 nucleotides
- Bulged bases
- 5UYK|1|A|A|397
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5UYK_113 not in the Motif Atlas
- Homologous match to IL_5J7L_002
- Geometric discrepancy: 0.1504
- The information below is about IL_5J7L_002
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 130
Unit IDs
5UYK|1|A|A|44
5UYK|1|A|G|45
*
5UYK|1|A|C|396
5UYK|1|A|A|397
5UYK|1|A|U|398
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain P
- 30S ribosomal protein S16
- Chain Z
- Elongation factor Tu 2
Coloring options: