IL_5UYK_156

3D structure

PDB id

5UYK (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

5UYK|1|A|G|1032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5UYK|1|A|G|1003
5UYK|1|A|A|1004
5UYK|1|A|A|1005
5UYK|1|A|G|1006
*
5UYK|1|A|U|1023
5UYK|1|A|G|1024
5UYK|1|A|U|1025
5UYK|1|A|G|1026
5UYK|1|A|C|1027
5UYK|1|A|C|1028
5UYK|1|A|U|1029
5UYK|1|A|U|1030
5UYK|1|A|C|1031
5UYK|1|A|G|1032
5UYK|1|A|G|1033
5UYK|1|A|G|1034
5UYK|1|A|A|1035
5UYK|1|A|A|1036
5UYK|1|A|C|1037

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain N

30S ribosomal protein S14