IL_5UYP_183
3D structure
- PDB id
- 5UYP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UUGAUGUGUAGGAUAGGUGG*CCACCCUUUAA
- Length
- 31 nucleotides
- Bulged bases
- 5UYP|1|01|U|2111, 5UYP|1|01|U|2118
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5UYP|1|01|U|2105
5UYP|1|01|U|2106
5UYP|1|01|G|2107
5UYP|1|01|A|2108
5UYP|1|01|U|2109
5UYP|1|01|G|2110
5UYP|1|01|U|2111
5UYP|1|01|G|2112
5UYP|1|01|U|2113
5UYP|1|01|A|2114
5UYP|1|01|G|2115
5UYP|1|01|G|2116
5UYP|1|01|A|2117
5UYP|1|01|U|2118
5UYP|1|01|A|2119
5UYP|1|01|G|2120
5UYP|1|01|G|2121
5UYP|1|01|U|2122
5UYP|1|01|G|2123
5UYP|1|01|G|2124
*
5UYP|1|01|C|2174
5UYP|1|01|C|2175
5UYP|1|01|A|2176
5UYP|1|01|C|2177
5UYP|1|01|C|2178
5UYP|1|01|C|2179
5UYP|1|01|U|2180
5UYP|1|01|U|2181
5UYP|1|01|U|2182
5UYP|1|01|A|2183
5UYP|1|01|A|2184
Current chains
- Chain 01
- 23S ribosomal RNA
Nearby chains
- Chain 03
- 50S ribosomal protein L1
- Chain X
- Transfer RNA; tRNA
Coloring options: