IL_5UYQ_149
3D structure
- PDB id
- 5UYQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GA*UAC
- Length
- 5 nucleotides
- Bulged bases
- 5UYQ|1|A|A|1394
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5UYQ_149 not in the Motif Atlas
- Homologous match to IL_4LFB_035
- Geometric discrepancy: 0.1969
- The information below is about IL_4LFB_035
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.5
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 129
Unit IDs
5UYQ|1|A|G|922
5UYQ|1|A|A|923
*
5UYQ|1|A|U|1393
5UYQ|1|A|A|1394
5UYQ|1|A|C|1395
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain E
- 30S ribosomal protein S5
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