IL_5UYQ_187

3D structure

PDB id

5UYQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

5UYQ|1|A|C|1031, 5UYQ|1|A|G|1032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5UYQ|1|A|G|1003
5UYQ|1|A|A|1004
5UYQ|1|A|A|1005
5UYQ|1|A|G|1006
*
5UYQ|1|A|U|1023
5UYQ|1|A|G|1024
5UYQ|1|A|U|1025
5UYQ|1|A|G|1026
5UYQ|1|A|C|1027
5UYQ|1|A|C|1028
5UYQ|1|A|U|1029
5UYQ|1|A|U|1030
5UYQ|1|A|C|1031
5UYQ|1|A|G|1032
5UYQ|1|A|G|1033
5UYQ|1|A|G|1034
5UYQ|1|A|A|1035
5UYQ|1|A|A|1036
5UYQ|1|A|C|1037

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain N

30S ribosomal protein S14